Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AC092647.4-201ENST00000457211 535 ntBASIC18.83■□□□□ 0.6
SP110Q9HB58 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.83■□□□□ 0.6
SP110Q9HB58 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.83■□□□□ 0.6
SP110Q9HB58 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.83■□□□□ 0.6
SP110Q9HB58 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 AC090164.3-201ENST00000610780 2143 ntBASIC18.83■□□□□ 0.6
SP110Q9HB58 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SP110Q9HB58 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.83■□□□□ 0.6
SP110Q9HB58 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.83■□□□□ 0.6
SP110Q9HB58 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP110Q9HB58 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SP110Q9HB58 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.82■□□□□ 0.6
SP110Q9HB58 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 TSPY5P-201ENST00000426936 936 ntBASIC18.82■□□□□ 0.6
SP110Q9HB58 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 AC104076.2-201ENST00000448912 469 ntBASIC18.82■□□□□ 0.6
SP110Q9HB58 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.82■□□□□ 0.6
SP110Q9HB58 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.82■□□□□ 0.6
SP110Q9HB58 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.82■□□□□ 0.6
SP110Q9HB58 AL157888.1-201ENST00000631930 593 ntBASIC18.82■□□□□ 0.6
SP110Q9HB58 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
SP110Q9HB58 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SP110Q9HB58 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.82■□□□□ 0.6
SP110Q9HB58 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SP110Q9HB58 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SP110Q9HB58 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP110Q9HB58 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
SP110Q9HB58 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.81■□□□□ 0.6
SP110Q9HB58 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SP110Q9HB58 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SP110Q9HB58 AC104581.1-202ENST00000635932 2618 ntBASIC18.81■□□□□ 0.6
SP110Q9HB58 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.81■□□□□ 0.6
SP110Q9HB58 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SP110Q9HB58 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.81■□□□□ 0.6
SP110Q9HB58 DUX4L26-201ENST00000489078 1255 ntBASIC18.81■□□□□ 0.6
SP110Q9HB58 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.81■□□□□ 0.6
SP110Q9HB58 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.81■□□□□ 0.6
SP110Q9HB58 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SP110Q9HB58 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.81■□□□□ 0.6
SP110Q9HB58 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SP110Q9HB58 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SP110Q9HB58 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SP110Q9HB58 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SP110Q9HB58 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP110Q9HB58 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.8■□□□□ 0.6
SP110Q9HB58 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.8■□□□□ 0.6
SP110Q9HB58 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SP110Q9HB58 HOMER2P1-201ENST00000455653 964 ntBASIC18.8■□□□□ 0.6
SP110Q9HB58 RASA4DP-201ENST00000460726 1199 ntBASIC18.8■□□□□ 0.6
SP110Q9HB58 AL359075.1-203ENST00000462729 1002 ntBASIC18.8■□□□□ 0.6
SP110Q9HB58 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.8■□□□□ 0.6
SP110Q9HB58 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.8■□□□□ 0.6
SP110Q9HB58 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.8■□□□□ 0.6
SP110Q9HB58 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SP110Q9HB58 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.8■□□□□ 0.6
SP110Q9HB58 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP110Q9HB58 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms