Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 GUSBP5-201ENST00000418136 578 ntBASIC17.52■□□□□ 0.4
VCX3BQ9H321 TSPY21P-201ENST00000433481 731 ntBASIC17.52■□□□□ 0.4
VCX3BQ9H321 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
VCX3BQ9H321 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCX3BQ9H321 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VCX3BQ9H321 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.52■□□□□ 0.39
VCX3BQ9H321 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCX3BQ9H321 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
VCX3BQ9H321 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
VCX3BQ9H321 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCX3BQ9H321 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VCX3BQ9H321 RASA4CP-201ENST00000424092 1398 ntBASIC17.52■□□□□ 0.39
VCX3BQ9H321 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.52■□□□□ 0.39
VCX3BQ9H321 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCX3BQ9H321 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
VCX3BQ9H321 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
VCX3BQ9H321 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VCX3BQ9H321 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 LINC00602-201ENST00000629776 2065 ntBASIC17.51■□□□□ 0.39
VCX3BQ9H321 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCX3BQ9H321 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VCX3BQ9H321 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.5■□□□□ 0.39
VCX3BQ9H321 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.5■□□□□ 0.39
VCX3BQ9H321 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VCX3BQ9H321 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms