Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 TREX1-205ENST00000625293 1783 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 HOXB1-202ENST00000577092 1414 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 METTL21AP1-201ENST00000438852 635 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 CYMP-203ENST00000474680 1263 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 AC239800.4-201ENST00000603712 296 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 AC087289.5-201ENST00000586076 3175 ntBASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2OQ9C0C9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 AC026471.1-201ENST00000564629 3026 ntBASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 RBM17P3-201ENST00000417687 1192 ntBASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 Z83851.2-201ENST00000609564 659 ntBASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.2■□□□□ 0.82
UBE2OQ9C0C9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 FAM8A3P-201ENST00000427218 844 ntBASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 AC092910.1-201ENST00000482027 1129 ntBASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2OQ9C0C9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms