Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AC084018.2-201ENST00000613093 2607 ntBASIC16.88■□□□□ 0.29
COPS4Q9BT78 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 NBPF21P-201ENST00000425093 1451 ntBASIC16.87■□□□□ 0.29
COPS4Q9BT78 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 KRT17P3-201ENST00000420566 1262 ntBASIC16.87■□□□□ 0.29
COPS4Q9BT78 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
COPS4Q9BT78 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPS4Q9BT78 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 AC004264.1-201ENST00000608354 794 ntBASIC16.86■□□□□ 0.29
COPS4Q9BT78 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.86■□□□□ 0.29
COPS4Q9BT78 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 AC112777.1-201ENST00000540175 1423 ntBASIC16.86■□□□□ 0.29
COPS4Q9BT78 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPS4Q9BT78 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
COPS4Q9BT78 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AC108860.2-201ENST00000562760 2183 ntBASIC16.85■□□□□ 0.29
COPS4Q9BT78 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms