Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 RAP2CP1-201ENST00000605103 478 ntBASIC13.9□□□□□ -0.18
AP1S3Q96PC3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP1S3Q96PC3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.9□□□□□ -0.19
AP1S3Q96PC3 KRT8P8-201ENST00000434750 1448 ntBASIC13.9□□□□□ -0.19
AP1S3Q96PC3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP1S3Q96PC3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 YBX1P10-201ENST00000444752 975 ntBASIC13.89□□□□□ -0.19
AP1S3Q96PC3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 AC097376.2-205ENST00000610159 5334 ntBASIC13.89□□□□□ -0.19
AP1S3Q96PC3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S3Q96PC3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AC006015.1-201ENST00000429970 570 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AC093787.1-201ENST00000450396 207 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AL121906.2-201ENST00000621597 723 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AC046158.3-201ENST00000624947 2558 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 AP006587.1-201ENST00000534129 1502 ntBASIC13.88□□□□□ -0.19
AP1S3Q96PC3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S3Q96PC3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms