Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C9orf85Q96MD7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C9orf85Q96MD7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
C9orf85Q96MD7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 LINC00896-202ENST00000609602 2128 ntBASIC13.33□□□□□ -0.28
C9orf85Q96MD7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 AC097488.1-201ENST00000507834 756 ntBASIC13.33□□□□□ -0.28
C9orf85Q96MD7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C9orf85Q96MD7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AC009102.3-201ENST00000623118 1491 ntBASIC13.32□□□□□ -0.28
C9orf85Q96MD7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 MIR149-201ENST00000384879 89 ntBASIC13.32□□□□□ -0.28
C9orf85Q96MD7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 ITM2C-210ENST00000620962 501 ntBASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AL163051.1-201ENST00000569214 1512 ntBASIC13.32□□□□□ -0.28
C9orf85Q96MD7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AC036111.1-201ENST00000533973 1582 ntBASIC13.32□□□□□ -0.28
C9orf85Q96MD7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C9orf85Q96MD7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.31□□□□□ -0.28
C9orf85Q96MD7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 SDHAP2-201ENST00000455183 2001 ntBASIC13.31□□□□□ -0.28
C9orf85Q96MD7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 FAM201B-201ENST00000458407 597 ntBASIC13.31□□□□□ -0.28
C9orf85Q96MD7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.31□□□□□ -0.28
C9orf85Q96MD7 MIR4674-201ENST00000582457 87 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms