Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA5Q96FF9 AC099343.3-201ENST00000605834 2503 ntBASIC21.44■■□□□ 1.02
CDCA5Q96FF9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 AC211486.1-202ENST00000416371 468 ntBASIC21.43■■□□□ 1.02
CDCA5Q96FF9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 AC211476.1-201ENST00000503899 468 ntBASIC21.43■■□□□ 1.02
CDCA5Q96FF9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 KRT18P28-201ENST00000453838 1332 ntBASIC21.43■■□□□ 1.02
CDCA5Q96FF9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA5Q96FF9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 MTDHP5-201ENST00000598980 586 ntBASIC21.42■■□□□ 1.02
CDCA5Q96FF9 AL024508.2-201ENST00000607749 1894 ntBASIC21.42■■□□□ 1.02
CDCA5Q96FF9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA5Q96FF9 AC125437.2-201ENST00000625180 2167 ntBASIC21.41■■□□□ 1.02
CDCA5Q96FF9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.41■■□□□ 1.02
CDCA5Q96FF9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 AP006288.1-201ENST00000446065 395 ntBASIC21.41■■□□□ 1.02
CDCA5Q96FF9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA5Q96FF9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 METTL21AP1-201ENST00000438852 635 ntBASIC21.4■■□□□ 1.02
CDCA5Q96FF9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 AL596442.2-201ENST00000610240 980 ntBASIC21.4■■□□□ 1.02
CDCA5Q96FF9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CDCA5Q96FF9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms