Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 AL163051.1-201ENST00000569214 1512 ntBASIC18.92■□□□□ 0.62
HDAC11Q96DB2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 AC104390.1-201ENST00000555663 520 ntBASIC18.92■□□□□ 0.62
HDAC11Q96DB2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.92■□□□□ 0.62
HDAC11Q96DB2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 AC009947.2-201ENST00000444014 672 ntBASIC18.91■□□□□ 0.62
HDAC11Q96DB2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 NEK4P2-201ENST00000580004 1012 ntBASIC18.91■□□□□ 0.62
HDAC11Q96DB2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC11Q96DB2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 ECEL1P3-201ENST00000427961 737 ntBASIC18.9■□□□□ 0.62
HDAC11Q96DB2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 MIR3180-4-201ENST00000582223 153 ntBASIC18.9■□□□□ 0.62
HDAC11Q96DB2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 AC012306.2-201ENST00000609350 630 ntBASIC18.9■□□□□ 0.62
HDAC11Q96DB2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC11Q96DB2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.89■□□□□ 0.62
HDAC11Q96DB2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms