Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.96■□□□□ 0.47
ATL1Q8WXF7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ATL1Q8WXF7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATL1Q8WXF7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 MIR149-201ENST00000384879 89 ntBASIC17.95■□□□□ 0.46
ATL1Q8WXF7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 AC073912.3-201ENST00000624414 853 ntBASIC17.95■□□□□ 0.46
ATL1Q8WXF7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATL1Q8WXF7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 BICD1-207ENST00000551848 1962 ntBASIC17.94■□□□□ 0.46
ATL1Q8WXF7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 AC009102.3-201ENST00000623118 1491 ntBASIC17.94■□□□□ 0.46
ATL1Q8WXF7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATL1Q8WXF7 AC135050.7-201ENST00000624508 2218 ntBASIC17.94■□□□□ 0.46
ATL1Q8WXF7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 AC009947.2-201ENST00000444014 672 ntBASIC17.93■□□□□ 0.46
ATL1Q8WXF7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
ATL1Q8WXF7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms