Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 AC009102.3-201ENST00000623118 1491 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 MIR149-201ENST00000384879 89 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 HMGA1P5-201ENST00000412453 271 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 AL512604.3-201ENST00000569583 964 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 FAM87A-204ENST00000613235 858 ntBASIC17.21■□□□□ 0.35
NUP43Q8NFH3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NUP43Q8NFH3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
NUP43Q8NFH3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
NUP43Q8NFH3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.34
NUP43Q8NFH3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NUP43Q8NFH3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.21■□□□□ 0.34
NUP43Q8NFH3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 AC104390.1-201ENST00000555663 520 ntBASIC17.2■□□□□ 0.34
NUP43Q8NFH3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.2■□□□□ 0.34
NUP43Q8NFH3 SDHAP2-201ENST00000455183 2001 ntBASIC17.2■□□□□ 0.34
NUP43Q8NFH3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 AC018470.1-201ENST00000624790 3129 ntBASIC17.19■□□□□ 0.34
NUP43Q8NFH3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 KRT18P22-201ENST00000402024 1347 ntBASIC17.19■□□□□ 0.34
NUP43Q8NFH3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUP43Q8NFH3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.19■□□□□ 0.34
NUP43Q8NFH3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.18■□□□□ 0.34
NUP43Q8NFH3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NUP43Q8NFH3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUP43Q8NFH3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.18■□□□□ 0.34
NUP43Q8NFH3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUP43Q8NFH3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms