Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RNF126P1-202ENST00000569893 925 ntBASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 AC116407.4-201ENST00000623319 1061 ntBASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01555Q8NAE3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 IER3-202ENST00000376377 1350 ntBASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01555Q8NAE3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 KRT89P-201ENST00000620027 1478 ntBASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms