Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AC093827.2-201ENST00000512654 315 ntBASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AL355075.4-201ENST00000554988 638 ntBASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AL353719.1-201ENST00000566847 864 ntBASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AL023803.3-201ENST00000615559 522 ntBASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNAAF3Q8N9W5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 C2orf69P3-201ENST00000565542 1120 ntBASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 MIR4497-201ENST00000583208 89 ntBASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 AC116562.4-202ENST00000641738 218 ntBASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.73■□□□□ 0.59
DNAAF3Q8N9W5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 AC099343.3-201ENST00000605834 2503 ntBASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 BX088651.1-201ENST00000540551 451 ntBASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 KRT8P50-201ENST00000562022 1438 ntBASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DNAAF3Q8N9W5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms