Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 AC008556.1-201ENST00000610908 2040 ntBASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC50Q8IVM0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 MESTP1-201ENST00000404287 994 ntBASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 AC142381.4-202ENST00000563973 229 ntBASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 SLC25A1P4-201ENST00000567977 778 ntBASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 AP000692.2-201ENST00000608391 879 ntBASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 AC139713.2-201ENST00000641328 2723 ntBASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC50Q8IVM0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms