Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 AC099343.3-201ENST00000605834 2503 ntBASIC22.99■■□□□ 1.27
COL23A1Q86Y22 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.98■■□□□ 1.27
COL23A1Q86Y22 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 MIR149-201ENST00000384879 89 ntBASIC22.98■■□□□ 1.27
COL23A1Q86Y22 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 ALG1L5P-201ENST00000482043 771 ntBASIC22.98■■□□□ 1.27
COL23A1Q86Y22 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 MIR4469-201ENST00000583919 79 ntBASIC22.98■■□□□ 1.27
COL23A1Q86Y22 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.98■■□□□ 1.27
COL23A1Q86Y22 MTMR9LP-203ENST00000426597 1545 ntBASIC22.98■■□□□ 1.27
COL23A1Q86Y22 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 HEIH-201ENST00000623091 1652 ntBASIC22.97■■□□□ 1.27
COL23A1Q86Y22 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 AL035633.1-201ENST00000406139 838 ntBASIC22.97■■□□□ 1.27
COL23A1Q86Y22 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 AL645939.2-201ENST00000427340 991 ntBASIC22.97■■□□□ 1.27
COL23A1Q86Y22 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 AC008687.5-201ENST00000593746 558 ntBASIC22.97■■□□□ 1.27
COL23A1Q86Y22 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.97■■□□□ 1.27
COL23A1Q86Y22 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 AC254562.1-201ENST00000417586 456 ntBASIC22.96■■□□□ 1.27
COL23A1Q86Y22 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 AP000867.4-201ENST00000641616 219 ntBASIC22.96■■□□□ 1.27
COL23A1Q86Y22 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL23A1Q86Y22 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL23A1Q86Y22 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms