Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 GMCL1P1-201ENST00000463439 1581 ntBASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 AC233263.1-201ENST00000578059 224 ntBASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 AC069544.1-201ENST00000609399 999 ntBASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRTM1Q86UE6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 AC006116.8-202ENST00000587620 1550 ntBASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 BCL2-203ENST00000589955 5011 ntBASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRTM1Q86UE6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 AC108860.2-201ENST00000562760 2183 ntBASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 KRASP1-201ENST00000407852 552 ntBASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 AC142086.2-201ENST00000569753 217 ntBASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 AL023875.1-201ENST00000640777 796 ntBASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
LRRTM1Q86UE6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LRRTM1Q86UE6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRRTM1Q86UE6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
LRRTM1Q86UE6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM1Q86UE6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRRTM1Q86UE6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM1Q86UE6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms