Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP1BQ7LBR1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP1BQ7LBR1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AK4P3-201ENST00000418260 669 ntBASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 COX11P1-201ENST00000489116 835 ntBASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AC141257.4-201ENST00000634557 245 ntBASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AC136944.6-201ENST00000634818 245 ntBASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AC073508.3-201ENST00000619697 1419 ntBASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 AL032819.2-201ENST00000624543 2162 ntBASIC16.94■□□□□ 0.3
CHMP1BQ7LBR1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP1BQ7LBR1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms