Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 SEC1P-202ENST00000473944 940 ntBASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 AC024243.1-201ENST00000609234 778 ntBASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 ANO7L1-203ENST00000602586 1720 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 KRT18P35-201ENST00000510488 1269 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 KRT18P41-201ENST00000518924 1277 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 MIR3180-4-201ENST00000582223 153 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 NTF6B-201ENST00000591913 560 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 AL445228.2-201ENST00000605589 952 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 AL357033.4-201ENST00000617703 1807 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 AL354751.1-201ENST00000412768 1863 ntBASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39BQ5VTQ0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.14■□□□□ 0.66
TTC39BQ5VTQ0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 AP000593.1-201ENST00000393668 712 ntBASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 AC104390.1-201ENST00000555663 520 ntBASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 MYC-208ENST00000641036 567 ntBASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC39BQ5VTQ0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 AL359075.1-203ENST00000462729 1002 ntBASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 AC009065.1-201ENST00000564055 1225 ntBASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms