Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 AC131212.4-201ENST00000623606 975 ntBASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 GMCL1P1-201ENST00000463439 1581 ntBASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LINC00242Q5T6M2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
LINC00242Q5T6M2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LINC00242Q5T6M2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LINC00242Q5T6M2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 AL445675.2-201ENST00000620291 557 ntBASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00242Q5T6M2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms