Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.26□□□□□ -0.93
LINC01554Q52M75 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC9.26□□□□□ -0.93
LINC01554Q52M75 AC092720.2-201ENST00000602388 1665 ntBASIC9.26□□□□□ -0.93
LINC01554Q52M75 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC01554Q52M75 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
LINC01554Q52M75 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 IGHV3-19-201ENST00000521488 291 ntBASIC9.25□□□□□ -0.93
LINC01554Q52M75 AICDA-202ENST00000537228 667 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AL136162.1-201ENST00000607711 1078 ntBASIC9.25□□□□□ -0.93
LINC01554Q52M75 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AP004607.4-201ENST00000530158 1459 ntBASIC9.25□□□□□ -0.93
LINC01554Q52M75 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 TSPY26P-201ENST00000476365 1326 ntBASIC9.25□□□□□ -0.93
LINC01554Q52M75 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01554Q52M75 AC099778.1-201ENST00000568593 1911 ntBASIC9.25□□□□□ -0.93
LINC01554Q52M75 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LINC01554Q52M75 PPP1R26P4-201ENST00000619065 3527 ntBASIC9.25□□□□□ -0.93
LINC01554Q52M75 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 STAC-204ENST00000457375 1366 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms