Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DSC1Q08554 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
DSC1Q08554 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.5■□□□□ 0.71
DSC1Q08554 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DSC1Q08554 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.5■□□□□ 0.71
DSC1Q08554 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.5■□□□□ 0.71
DSC1Q08554 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.5■□□□□ 0.71
DSC1Q08554 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.5■□□□□ 0.71
DSC1Q08554 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.5■□□□□ 0.71
DSC1Q08554 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.5■□□□□ 0.71
DSC1Q08554 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
DSC1Q08554 AF238378.1-201ENST00000526806 358 ntBASIC19.5■□□□□ 0.71
DSC1Q08554 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.5■□□□□ 0.71
DSC1Q08554 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.5■□□□□ 0.71
DSC1Q08554 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
DSC1Q08554 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DSC1Q08554 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 ANO7L1-203ENST00000602586 1720 ntBASIC19.5■□□□□ 0.71
DSC1Q08554 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DSC1Q08554 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.49■□□□□ 0.71
DSC1Q08554 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.49■□□□□ 0.71
DSC1Q08554 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.49■□□□□ 0.71
DSC1Q08554 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.49■□□□□ 0.71
DSC1Q08554 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.49■□□□□ 0.71
DSC1Q08554 MIR5100-201ENST00000579544 119 ntBASIC19.49■□□□□ 0.71
DSC1Q08554 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
DSC1Q08554 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DSC1Q08554 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DSC1Q08554 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
DSC1Q08554 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 MRPL3P1-201ENST00000400109 1033 ntBASIC19.48■□□□□ 0.71
DSC1Q08554 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.48■□□□□ 0.71
DSC1Q08554 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DSC1Q08554 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
DSC1Q08554 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DSC1Q08554 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.48■□□□□ 0.71
DSC1Q08554 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DSC1Q08554 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.47■□□□□ 0.71
DSC1Q08554 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 LINC00602-201ENST00000629776 2065 ntBASIC19.47■□□□□ 0.71
DSC1Q08554 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.47■□□□□ 0.71
DSC1Q08554 AP000347.1-202ENST00000435868 847 ntBASIC19.47■□□□□ 0.71
DSC1Q08554 MTCL1P1-201ENST00000446207 792 ntBASIC19.47■□□□□ 0.71
DSC1Q08554 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.47■□□□□ 0.71
DSC1Q08554 AC096582.2-201ENST00000510860 516 ntBASIC19.47■□□□□ 0.71
DSC1Q08554 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.47■□□□□ 0.71
DSC1Q08554 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DSC1Q08554 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.47■□□□□ 0.71
DSC1Q08554 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DSC1Q08554 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.47■□□□□ 0.71
DSC1Q08554 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.47■□□□□ 0.71
DSC1Q08554 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DSC1Q08554 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.46■□□□□ 0.71
DSC1Q08554 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DSC1Q08554 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms