Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH11P55287 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH11P55287 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH11P55287 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH11P55287 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDH11P55287 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 MTMR9LP-203ENST00000426597 1545 ntBASIC16.86■□□□□ 0.29
CDH11P55287 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDH11P55287 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH11P55287 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 MIR1238-201ENST00000408483 83 ntBASIC16.86■□□□□ 0.29
CDH11P55287 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH11P55287 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH11P55287 KRT18P21-201ENST00000515767 1272 ntBASIC16.86■□□□□ 0.29
CDH11P55287 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 AL445675.2-201ENST00000620291 557 ntBASIC16.86■□□□□ 0.29
CDH11P55287 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH11P55287 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH11P55287 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH11P55287 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH11P55287 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH11P55287 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDH11P55287 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.85■□□□□ 0.29
CDH11P55287 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH11P55287 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH11P55287 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH11P55287 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.85■□□□□ 0.29
CDH11P55287 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH11P55287 AC026271.3-201ENST00000571884 352 ntBASIC16.85■□□□□ 0.29
CDH11P55287 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH11P55287 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH11P55287 AC097493.4-201ENST00000641197 219 ntBASIC16.85■□□□□ 0.29
CDH11P55287 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH11P55287 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH11P55287 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH11P55287 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH11P55287 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CDH11P55287 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH11P55287 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH11P55287 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 AC116562.2-201ENST00000507042 360 ntBASIC16.84■□□□□ 0.29
CDH11P55287 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.84■□□□□ 0.29
CDH11P55287 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH11P55287 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH11P55287 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH11P55287 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH11P55287 MYC-208ENST00000641036 567 ntBASIC16.84■□□□□ 0.29
CDH11P55287 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
CDH11P55287 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH11P55287 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms