Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAD23BP54727 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RAD23BP54727 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 DUX4L26-201ENST00000489078 1255 ntBASIC19.64■□□□□ 0.73
RAD23BP54727 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RAD23BP54727 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.64■□□□□ 0.73
RAD23BP54727 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.64■□□□□ 0.73
RAD23BP54727 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
RAD23BP54727 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAD23BP54727 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.64■□□□□ 0.73
RAD23BP54727 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAD23BP54727 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.64■□□□□ 0.73
RAD23BP54727 SDHAP2-201ENST00000455183 2001 ntBASIC19.64■□□□□ 0.73
RAD23BP54727 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RAD23BP54727 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD23BP54727 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD23BP54727 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAD23BP54727 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.63■□□□□ 0.73
RAD23BP54727 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD23BP54727 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAD23BP54727 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD23BP54727 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
RAD23BP54727 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.63■□□□□ 0.73
RAD23BP54727 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
RAD23BP54727 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RAD23BP54727 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RAD23BP54727 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
RAD23BP54727 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
RAD23BP54727 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD23BP54727 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAD23BP54727 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD23BP54727 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD23BP54727 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD23BP54727 AC090164.3-201ENST00000610780 2143 ntBASIC19.63■□□□□ 0.73
RAD23BP54727 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.62■□□□□ 0.73
RAD23BP54727 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAD23BP54727 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAD23BP54727 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.62■□□□□ 0.73
RAD23BP54727 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.62■□□□□ 0.73
RAD23BP54727 MIR149-201ENST00000384879 89 ntBASIC19.62■□□□□ 0.73
RAD23BP54727 SPDYE15P-201ENST00000424157 909 ntBASIC19.62■□□□□ 0.73
RAD23BP54727 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAD23BP54727 KRT18P38-201ENST00000449496 1282 ntBASIC19.62■□□□□ 0.73
RAD23BP54727 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 RASA4DP-201ENST00000460726 1199 ntBASIC19.62■□□□□ 0.73
RAD23BP54727 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.62■□□□□ 0.73
RAD23BP54727 AC063952.2-201ENST00000498792 1227 ntBASIC19.62■□□□□ 0.73
RAD23BP54727 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
RAD23BP54727 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
RAD23BP54727 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD23BP54727 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 AC009102.3-201ENST00000623118 1491 ntBASIC19.61■□□□□ 0.73
RAD23BP54727 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.61■□□□□ 0.73
RAD23BP54727 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms