Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.68e-8■■□□□ 12
NCBP2P52298 NGDN-208ENST00000556378 803 ntTSL 215.64■□□□□ 0.097e-8■■□□□ 12
NCBP2P52298 NGDN-213ENST00000557097 270 ntTSL 215.29■□□□□ 0.047e-8■■□□□ 12
NCBP2P52298 NGDN-203ENST00000553336 712 ntTSL 315.29■□□□□ 0.047e-8■■□□□ 12
NCBP2P52298 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.177e-8■■□□□ 12
NCBP2P52298 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.187e-8■■□□□ 12
NCBP2P52298 NGDN-204ENST00000553439 2763 ntTSL 24.19□□□□□ -1.747e-8■■□□□ 12
NCBP2P52298 IP6K2-212ENST00000433104 2490 ntTSL 216.44■□□□□ 0.221e-6■■□□□ 12
NCBP2P52298 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.4□□□□□ -0.261e-6■■□□□ 12
NCBP2P52298 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.31e-6■■□□□ 12
NCBP2P52298 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.371e-6■■□□□ 12
NCBP2P52298 IP6K2-207ENST00000416707 1260 ntTSL 1 (best)12.64□□□□□ -0.391e-6■■□□□ 12
NCBP2P52298 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.21□□□□□ -0.451e-6■■□□□ 12
NCBP2P52298 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC12.15□□□□□ -0.461e-6■■□□□ 12
NCBP2P52298 IP6K2-220ENST00000449563 580 ntTSL 412.05□□□□□ -0.481e-6■■□□□ 12
NCBP2P52298 IP6K2-209ENST00000424035 568 ntTSL 411.5□□□□□ -0.571e-6■■□□□ 12
NCBP2P52298 IP6K2-214ENST00000436134 631 ntTSL 311.5□□□□□ -0.571e-6■■□□□ 12
NCBP2P52298 IP6K2-224ENST00000454335 631 ntTSL 411.36□□□□□ -0.591e-6■■□□□ 12
NCBP2P52298 IP6K2-206ENST00000413654 553 ntTSL 411.32□□□□□ -0.61e-6■■□□□ 12
NCBP2P52298 IP6K2-213ENST00000434860 560 ntTSL 411.32□□□□□ -0.61e-6■■□□□ 12
NCBP2P52298 IP6K2-203ENST00000412795 750 ntTSL 310.78□□□□□ -0.681e-6■■□□□ 12
NCBP2P52298 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC10.72□□□□□ -0.691e-6■■□□□ 12
NCBP2P52298 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC10.71□□□□□ -0.691e-6■■□□□ 12
NCBP2P52298 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC10.52□□□□□ -0.731e-6■■□□□ 12
NCBP2P52298 IP6K2-216ENST00000440424 537 ntTSL 410.48□□□□□ -0.731e-6■■□□□ 12
NCBP2P52298 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC10.41□□□□□ -0.741e-6■■□□□ 12
NCBP2P52298 IP6K2-204ENST00000412850 543 ntTSL 49.33□□□□□ -0.921e-6■■□□□ 12
NCBP2P52298 IP6K2-215ENST00000437427 576 ntTSL 47.65□□□□□ -1.181e-6■■□□□ 12
NCBP2P52298 IP6K2-217ENST00000443853 579 ntTSL 37.65□□□□□ -1.181e-6■■□□□ 12
NCBP2P52298 IP6K2-226ENST00000476645 464 ntTSL 47.5□□□□□ -1.211e-6■■□□□ 12
NCBP2P52298 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.28■□□□□ 0.522e-13■■□□□ 12
NCBP2P52298 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.6■□□□□ 0.252e-13■■□□□ 12
NCBP2P52298 LRPPRC-205ENST00000447246 1209 ntTSL 1 (best)12.4□□□□□ -0.422e-13■■□□□ 12
NCBP2P52298 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.52e-13■■□□□ 12
NCBP2P52298 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.85□□□□□ -1.319e-7■■□□□ 12
NCBP2P52298 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.31□□□□□ -1.569e-7■■□□□ 12
NCBP2P52298 EIF4G3-206ENST00000411888 1122 ntTSL 523.29■■□□□ 1.323e-11■■□□□ 12
NCBP2P52298 EIF4G3-208ENST00000438975 1270 ntTSL 519.15■□□□□ 0.663e-11■■□□□ 12
NCBP2P52298 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.57■□□□□ 0.43e-11■■□□□ 12
NCBP2P52298 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.163e-11■■□□□ 12
NCBP2P52298 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.153e-11■■□□□ 12
NCBP2P52298 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.173e-11■■□□□ 12
NCBP2P52298 EIF4G3-213ENST00000634778 1343 ntTSL 213.04□□□□□ -0.323e-11■■□□□ 12
NCBP2P52298 FMO5-205ENST00000527849 2410 ntTSL 516.26■□□□□ 0.199e-18■■□□□ 12
NCBP2P52298 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.84■□□□□ 0.139e-18■■□□□ 12
NCBP2P52298 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.259e-18■■□□□ 12
NCBP2P52298 FMO5-209ENST00000619062 1842 ntTSL 211.53□□□□□ -0.569e-18■■□□□ 12
NCBP2P52298 FMO5-204ENST00000478432 1606 ntTSL 28.51□□□□□ -1.059e-18■■□□□ 12
NCBP2P52298 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.91□□□□□ -1.149e-18■■□□□ 12
NCBP2P52298 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.21□□□□□ -1.269e-18■■□□□ 12
NCBP2P52298 FMO5-207ENST00000533848 618 ntTSL 47.08□□□□□ -1.289e-18■■□□□ 12
NCBP2P52298 FMO5-206ENST00000533174 671 ntTSL 45.67□□□□□ -1.59e-18■■□□□ 12
NCBP2P52298 SRSF1-206ENST00000583741 1465 ntTSL 518.48■□□□□ 0.555e-25■■□□□ 11.9
NCBP2P52298 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.46■□□□□ 0.235e-25■■□□□ 11.9
NCBP2P52298 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.225e-25■■□□□ 11.9
NCBP2P52298 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.35■□□□□ 0.215e-25■■□□□ 11.9
NCBP2P52298 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.95□□□□□ -0.345e-25■■□□□ 11.9
NCBP2P52298 SRSF1-202ENST00000578430 689 ntTSL 212.62□□□□□ -0.395e-25■■□□□ 11.9
NCBP2P52298 SRSF1-204ENST00000581979 1720 ntTSL 1 (best)11.83□□□□□ -0.525e-25■■□□□ 11.9
NCBP2P52298 TNPO1-211ENST00000518279 563 ntTSL 415.24■□□□□ 0.035e-8■■□□□ 11.9
NCBP2P52298 TNPO1-212ENST00000520850 863 ntTSL 215.02■□□□□ -05e-8■■□□□ 11.9
NCBP2P52298 TNPO1-210ENST00000515483 549 ntTSL 413□□□□□ -0.335e-8■■□□□ 11.9
NCBP2P52298 TNPO1-213ENST00000523768 2632 ntTSL 2 BASIC10.68□□□□□ -0.75e-8■■□□□ 11.9
NCBP2P52298 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.79□□□□□ -1.165e-8■■□□□ 11.9
NCBP2P52298 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.35e-8■■□□□ 11.9
NCBP2P52298 TNPO1-209ENST00000513944 569 ntTSL 42.62□□□□□ -1.995e-8■■□□□ 11.9
NCBP2P52298 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.091e-7■■□□□ 11.9
NCBP2P52298 NRIP1-205ENST00000637630 573 ntTSL 311.29□□□□□ -0.61e-7■■□□□ 11.9
NCBP2P52298 NRIP1-207ENST00000638122 543 ntTSL 1 (best)11.04□□□□□ -0.641e-7■■□□□ 11.9
NCBP2P52298 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.751e-7■■□□□ 11.9
NCBP2P52298 NRIP1-206ENST00000637963 498 ntTSL 49.14□□□□□ -0.951e-7■■□□□ 11.9
NCBP2P52298 FAM169A-205ENST00000513277 803 ntTSL 314.76□□□□□ -0.051e-6■■□□□ 11.9
NCBP2P52298 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.28□□□□□ -1.721e-6■■□□□ 11.9
NCBP2P52298 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.811e-6■■□□□ 11.9
NCBP2P52298 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.43□□□□□ -0.264e-7■■□□□ 11.9
NCBP2P52298 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC10.32□□□□□ -0.764e-7■■□□□ 11.9
NCBP2P52298 DIS3L2-213ENST00000445090 3250 ntTSL 1 (best)10.04□□□□□ -0.84e-7■■□□□ 11.9
NCBP2P52298 DIS3L2-203ENST00000390005 3328 ntTSL 1 (best)9.02□□□□□ -0.974e-7■■□□□ 11.9
NCBP2P52298 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.174e-7■■□□□ 11.9
NCBP2P52298 DIS3L2-212ENST00000441279 570 ntTSL 46.04□□□□□ -1.444e-7■■□□□ 11.9
NCBP2P52298 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.271e-6■■□□□ 11.9
NCBP2P52298 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.31e-6■■□□□ 11.9
NCBP2P52298 THRAP3-204ENST00000478853 380 ntAPPRIS ALT2 TSL 214.6□□□□□ -0.073e-17■■□□□ 11.9
NCBP2P52298 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.553e-17■■□□□ 11.9
NCBP2P52298 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.633e-17■■□□□ 11.9
NCBP2P52298 PSEN1-225ENST00000560005 699 ntTSL 318.8■□□□□ 0.62e-8■■□□□ 11.9
NCBP2P52298 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.08■□□□□ 0.482e-8■■□□□ 11.9
NCBP2P52298 PSEN1-207ENST00000553599 591 ntTSL 418.08■□□□□ 0.482e-8■■□□□ 11.9
NCBP2P52298 PSEN1-210ENST00000554131 591 ntTSL 317.17■□□□□ 0.342e-8■■□□□ 11.9
NCBP2P52298 LETMD1-224ENST00000550446 562 ntTSL 317.13■□□□□ 0.332e-8■■□□□ 11.9
NCBP2P52298 PSEN1-208ENST00000553719 712 ntTSL 216.83■□□□□ 0.282e-8■■□□□ 11.9
NCBP2P52298 PSEN1-212ENST00000555254 754 ntTSL 316.6■□□□□ 0.252e-8■■□□□ 11.9
NCBP2P52298 PSEN1-206ENST00000553447 572 ntTSL 416.58■□□□□ 0.242e-8■■□□□ 11.9
NCBP2P52298 LETMD1-220ENST00000549686 563 ntTSL 216.36■□□□□ 0.212e-8■■□□□ 11.9
NCBP2P52298 LETMD1-215ENST00000548390 549 ntTSL 216.36■□□□□ 0.212e-8■■□□□ 11.9
NCBP2P52298 PSEN1-218ENST00000556864 574 ntTSL 516.33■□□□□ 0.22e-8■■□□□ 11.9
NCBP2P52298 LETMD1-216ENST00000548401 433 ntTSL 316.08■□□□□ 0.162e-8■■□□□ 11.9
NCBP2P52298 PSEN1-217ENST00000556533 550 ntTSL 515.82■□□□□ 0.122e-8■■□□□ 11.9
NCBP2P52298 LETMD1-210ENST00000547555 1658 ntTSL 515.71■□□□□ 0.112e-8■■□□□ 11.9
NCBP2P52298 LETMD1-230ENST00000551477 1186 ntTSL 315.68■□□□□ 0.12e-8■■□□□ 11.9
Retrieved 100 of 18,329 protein–RNA pairs in 155.3 ms