Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC1A2P43004 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC1A2P43004 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A2P43004 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.33■□□□□ 0.52
SLC1A2P43004 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC1A2P43004 EGLN1P1-201ENST00000531623 762 ntBASIC18.33■□□□□ 0.52
SLC1A2P43004 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 AC010653.2-201ENST00000623505 997 ntBASIC18.33■□□□□ 0.52
SLC1A2P43004 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC1A2P43004 AL096828.2-201ENST00000567259 1965 ntBASIC18.33■□□□□ 0.52
SLC1A2P43004 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A2P43004 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC1A2P43004 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A2P43004 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC1A2P43004 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC1A2P43004 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC1A2P43004 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC1A2P43004 PHGDH-209ENST00000641074 1780 ntBASIC18.32■□□□□ 0.52
SLC1A2P43004 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.32■□□□□ 0.52
SLC1A2P43004 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.32■□□□□ 0.52
SLC1A2P43004 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 AC010947.1-201ENST00000623454 693 ntBASIC18.32■□□□□ 0.52
SLC1A2P43004 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 AC138028.4-201ENST00000564984 1845 ntBASIC18.32■□□□□ 0.52
SLC1A2P43004 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC1A2P43004 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC1A2P43004 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC1A2P43004 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC1A2P43004 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A2P43004 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC1A2P43004 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A2P43004 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC1A2P43004 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A2P43004 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A2P43004 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A2P43004 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC1A2P43004 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC1A2P43004 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A2P43004 AC112497.1-201ENST00000624824 639 ntBASIC18.31■□□□□ 0.52
SLC1A2P43004 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A2P43004 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A2P43004 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 PCDHB18P-201ENST00000524813 2368 ntBASIC18.31■□□□□ 0.52
SLC1A2P43004 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A2P43004 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A2P43004 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC1A2P43004 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC1A2P43004 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC1A2P43004 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 LETM1P2-201ENST00000597330 2178 ntBASIC18.3■□□□□ 0.52
SLC1A2P43004 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A2P43004 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A2P43004 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A2P43004 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A2P43004 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A2P43004 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms