Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.42■□□□□ 0.7
CTNNA1P35221 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.42■□□□□ 0.7
CTNNA1P35221 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.42■□□□□ 0.7
CTNNA1P35221 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNNA1P35221 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNNA1P35221 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTNNA1P35221 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
CTNNA1P35221 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.41■□□□□ 0.7
CTNNA1P35221 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.41■□□□□ 0.7
CTNNA1P35221 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.41■□□□□ 0.7
CTNNA1P35221 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.41■□□□□ 0.7
CTNNA1P35221 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.41■□□□□ 0.7
CTNNA1P35221 MIR564-202ENST00000385049 94 ntBASIC19.41■□□□□ 0.7
CTNNA1P35221 AL023284.2-201ENST00000405850 579 ntBASIC19.41■□□□□ 0.7
CTNNA1P35221 FAM197Y1-201ENST00000421178 764 ntBASIC19.41■□□□□ 0.7
CTNNA1P35221 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.41■□□□□ 0.7
CTNNA1P35221 FAM197Y4-202ENST00000622692 608 ntBASIC19.41■□□□□ 0.7
CTNNA1P35221 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.41■□□□□ 0.7
CTNNA1P35221 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.41■□□□□ 0.7
CTNNA1P35221 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.41■□□□□ 0.7
CTNNA1P35221 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTNNA1P35221 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTNNA1P35221 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTNNA1P35221 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTNNA1P35221 GPAT2P1-201ENST00000444924 1672 ntBASIC19.4■□□□□ 0.7
CTNNA1P35221 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CTNNA1P35221 OR6D1P-202ENST00000641007 5290 ntBASIC19.4■□□□□ 0.7
CTNNA1P35221 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CTNNA1P35221 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 AP000593.1-201ENST00000393668 712 ntBASIC19.4■□□□□ 0.7
CTNNA1P35221 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTNNA1P35221 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 CD177P1-201ENST00000606252 935 ntBASIC19.4■□□□□ 0.7
CTNNA1P35221 DGCR10-201ENST00000609839 495 ntBASIC19.4■□□□□ 0.7
CTNNA1P35221 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTNNA1P35221 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.4■□□□□ 0.7
CTNNA1P35221 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTNNA1P35221 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CTNNA1P35221 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTNNA1P35221 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTNNA1P35221 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTNNA1P35221 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTNNA1P35221 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTNNA1P35221 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms