Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MIR3197-201ENST00000582241 73 ntBASIC20.66■□□□□ 0.9
CTGFP29279 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.66■□□□□ 0.9
CTGFP29279 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.66■□□□□ 0.9
CTGFP29279 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CTGFP29279 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.66■□□□□ 0.9
CTGFP29279 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTGFP29279 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
CTGFP29279 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.65■□□□□ 0.9
CTGFP29279 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.65■□□□□ 0.9
CTGFP29279 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
CTGFP29279 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.65■□□□□ 0.9
CTGFP29279 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 AC009102.3-201ENST00000623118 1491 ntBASIC20.65■□□□□ 0.9
CTGFP29279 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CTGFP29279 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.65■□□□□ 0.9
CTGFP29279 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CTGFP29279 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.65■□□□□ 0.9
CTGFP29279 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.65■□□□□ 0.9
CTGFP29279 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.65■□□□□ 0.9
CTGFP29279 CYMP-203ENST00000474680 1263 ntBASIC20.65■□□□□ 0.9
CTGFP29279 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.65■□□□□ 0.9
CTGFP29279 RFPL4AP1-201ENST00000530883 850 ntBASIC20.65■□□□□ 0.9
CTGFP29279 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.65■□□□□ 0.9
CTGFP29279 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.65■□□□□ 0.9
CTGFP29279 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.65■□□□□ 0.9
CTGFP29279 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
CTGFP29279 MTDHP5-201ENST00000598980 586 ntBASIC20.65■□□□□ 0.9
CTGFP29279 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.65■□□□□ 0.9
CTGFP29279 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTGFP29279 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CTGFP29279 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTGFP29279 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTGFP29279 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CTGFP29279 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTGFP29279 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.64■□□□□ 0.89
CTGFP29279 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTGFP29279 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTGFP29279 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.64■□□□□ 0.89
CTGFP29279 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.64■□□□□ 0.89
CTGFP29279 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTGFP29279 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTGFP29279 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTGFP29279 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTGFP29279 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTGFP29279 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.64■□□□□ 0.89
CTGFP29279 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTGFP29279 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.63■□□□□ 0.89
CTGFP29279 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 LINC00602-201ENST00000629776 2065 ntBASIC20.63■□□□□ 0.89
CTGFP29279 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.63■□□□□ 0.89
CTGFP29279 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTGFP29279 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.63■□□□□ 0.89
CTGFP29279 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CTGFP29279 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 AC064836.3-201ENST00000607928 673 ntBASIC20.63■□□□□ 0.89
CTGFP29279 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.63■□□□□ 0.89
CTGFP29279 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.63■□□□□ 0.89
CTGFP29279 AP000867.4-201ENST00000641616 219 ntBASIC20.63■□□□□ 0.89
CTGFP29279 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTGFP29279 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTGFP29279 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
CTGFP29279 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.63■□□□□ 0.89
CTGFP29279 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
CTGFP29279 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTGFP29279 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.62■□□□□ 0.89
CTGFP29279 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTGFP29279 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTGFP29279 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.62■□□□□ 0.89
CTGFP29279 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.62■□□□□ 0.89
CTGFP29279 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms