Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.99■■□□□ 1.43
RXRBP28702 AC108073.2-201ENST00000464002 357 ntBASIC23.99■■□□□ 1.43
RXRBP28702 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.99■■□□□ 1.43
RXRBP28702 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 CR383656.12-201ENST00000549567 513 ntBASIC23.99■■□□□ 1.43
RXRBP28702 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC23.99■■□□□ 1.43
RXRBP28702 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.99■■□□□ 1.43
RXRBP28702 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.99■■□□□ 1.43
RXRBP28702 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RXRBP28702 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.98■■□□□ 1.43
RXRBP28702 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
RXRBP28702 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.98■■□□□ 1.43
RXRBP28702 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC23.98■■□□□ 1.43
RXRBP28702 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.98■■□□□ 1.43
RXRBP28702 AC067863.1-201ENST00000494933 530 ntBASIC23.98■■□□□ 1.43
RXRBP28702 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.98■■□□□ 1.43
RXRBP28702 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
RXRBP28702 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.98■■□□□ 1.43
RXRBP28702 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.98■■□□□ 1.43
RXRBP28702 AC015911.4-201ENST00000588022 1070 ntBASIC23.98■■□□□ 1.43
RXRBP28702 AC009154.2-201ENST00000621177 724 ntBASIC23.98■■□□□ 1.43
RXRBP28702 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RXRBP28702 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RXRBP28702 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RXRBP28702 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC23.97■■□□□ 1.43
RXRBP28702 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RXRBP28702 BASP1P1-201ENST00000430708 665 ntBASIC23.97■■□□□ 1.43
RXRBP28702 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.97■■□□□ 1.43
RXRBP28702 AC023141.5-201ENST00000458585 616 ntBASIC23.97■■□□□ 1.43
RXRBP28702 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.97■■□□□ 1.43
RXRBP28702 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.97■■□□□ 1.43
RXRBP28702 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RXRBP28702 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.97■■□□□ 1.43
RXRBP28702 AC004877.2-201ENST00000623941 599 ntBASIC23.97■■□□□ 1.43
RXRBP28702 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RXRBP28702 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RXRBP28702 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RXRBP28702 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RXRBP28702 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RXRBP28702 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RXRBP28702 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC23.96■■□□□ 1.43
RXRBP28702 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.96■■□□□ 1.43
RXRBP28702 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
RXRBP28702 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC23.96■■□□□ 1.43
RXRBP28702 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.96■■□□□ 1.43
RXRBP28702 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.96■■□□□ 1.43
RXRBP28702 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.96■■□□□ 1.43
RXRBP28702 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.96■■□□□ 1.43
RXRBP28702 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RXRBP28702 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RXRBP28702 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.95■■□□□ 1.42
RXRBP28702 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.95■■□□□ 1.42
RXRBP28702 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RXRBP28702 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.95■■□□□ 1.42
RXRBP28702 PRYP5-201ENST00000451909 266 ntBASIC23.95■■□□□ 1.42
RXRBP28702 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.95■■□□□ 1.42
RXRBP28702 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC23.95■■□□□ 1.42
RXRBP28702 AC084346.2-201ENST00000607097 949 ntBASIC23.95■■□□□ 1.42
RXRBP28702 MIR6799-201ENST00000620297 69 ntBASIC23.95■■□□□ 1.42
RXRBP28702 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RXRBP28702 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RXRBP28702 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RXRBP28702 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RXRBP28702 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.94■■□□□ 1.42
RXRBP28702 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.94■■□□□ 1.42
RXRBP28702 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RXRBP28702 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RXRBP28702 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.94■■□□□ 1.42
RXRBP28702 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RXRBP28702 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.94■■□□□ 1.42
RXRBP28702 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.94■■□□□ 1.42
RXRBP28702 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RXRBP28702 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.94■■□□□ 1.42
RXRBP28702 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RXRBP28702 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.94■■□□□ 1.42
RXRBP28702 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RXRBP28702 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RXRBP28702 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms