Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.09■□□□□ 0.33
NR4A1P22736 AL645608.8-201ENST00000606034 2086 ntBASIC17.09■□□□□ 0.33
NR4A1P22736 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
NR4A1P22736 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.09■□□□□ 0.33
NR4A1P22736 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NR4A1P22736 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.09■□□□□ 0.33
NR4A1P22736 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.09■□□□□ 0.33
NR4A1P22736 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.09■□□□□ 0.33
NR4A1P22736 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.09■□□□□ 0.33
NR4A1P22736 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.09■□□□□ 0.33
NR4A1P22736 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.09■□□□□ 0.33
NR4A1P22736 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR4A1P22736 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
NR4A1P22736 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NR4A1P22736 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.08■□□□□ 0.33
NR4A1P22736 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.08■□□□□ 0.33
NR4A1P22736 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
NR4A1P22736 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NR4A1P22736 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.08■□□□□ 0.32
NR4A1P22736 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.08■□□□□ 0.32
NR4A1P22736 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.08■□□□□ 0.32
NR4A1P22736 UBE2SP1-201ENST00000450587 669 ntBASIC17.08■□□□□ 0.32
NR4A1P22736 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.08■□□□□ 0.32
NR4A1P22736 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.08■□□□□ 0.32
NR4A1P22736 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.08■□□□□ 0.32
NR4A1P22736 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.08■□□□□ 0.32
NR4A1P22736 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NR4A1P22736 AC124016.1-201ENST00000609552 612 ntBASIC17.08■□□□□ 0.32
NR4A1P22736 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NR4A1P22736 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.08■□□□□ 0.32
NR4A1P22736 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NR4A1P22736 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NR4A1P22736 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.08■□□□□ 0.32
NR4A1P22736 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 SIRPAP1-201ENST00000448467 1770 ntBASIC17.07■□□□□ 0.32
NR4A1P22736 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 AC116351.2-201ENST00000606540 1585 ntBASIC17.07■□□□□ 0.32
NR4A1P22736 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NR4A1P22736 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.07■□□□□ 0.32
NR4A1P22736 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.07■□□□□ 0.32
NR4A1P22736 KRASP1-201ENST00000407852 552 ntBASIC17.07■□□□□ 0.32
NR4A1P22736 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.07■□□□□ 0.32
NR4A1P22736 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NR4A1P22736 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.07■□□□□ 0.32
NR4A1P22736 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
NR4A1P22736 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.07■□□□□ 0.32
NR4A1P22736 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.07■□□□□ 0.32
NR4A1P22736 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.07■□□□□ 0.32
NR4A1P22736 AC110285.5-201ENST00000611501 352 ntBASIC17.07■□□□□ 0.32
NR4A1P22736 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.07■□□□□ 0.32
NR4A1P22736 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.07■□□□□ 0.32
NR4A1P22736 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NR4A1P22736 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms