Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH3P22223 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDH3P22223 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDH3P22223 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18■□□□□ 0.47
CDH3P22223 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CDH3P22223 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CDH3P22223 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18■□□□□ 0.47
CDH3P22223 GRAMD4P1-201ENST00000435181 1110 ntBASIC18■□□□□ 0.47
CDH3P22223 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18■□□□□ 0.47
CDH3P22223 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18■□□□□ 0.47
CDH3P22223 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18■□□□□ 0.47
CDH3P22223 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18■□□□□ 0.47
CDH3P22223 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18■□□□□ 0.47
CDH3P22223 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH3P22223 AC024243.1-201ENST00000609234 778 ntBASIC18■□□□□ 0.47
CDH3P22223 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18■□□□□ 0.47
CDH3P22223 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CDH3P22223 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18■□□□□ 0.47
CDH3P22223 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CDH3P22223 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18■□□□□ 0.47
CDH3P22223 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH3P22223 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH3P22223 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH3P22223 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDH3P22223 AL161938.1-201ENST00000569833 2180 ntBASIC17.99■□□□□ 0.47
CDH3P22223 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDH3P22223 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH3P22223 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH3P22223 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDH3P22223 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH3P22223 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH3P22223 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH3P22223 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDH3P22223 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH3P22223 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH3P22223 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
CDH3P22223 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH3P22223 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH3P22223 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH3P22223 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH3P22223 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH3P22223 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH3P22223 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CDH3P22223 AC112497.1-201ENST00000624824 639 ntBASIC17.98■□□□□ 0.47
CDH3P22223 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH3P22223 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CDH3P22223 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH3P22223 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH3P22223 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms