Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CD58P19256 AL163051.1-201ENST00000569214 1512 ntBASIC19.75■□□□□ 0.75
CD58P19256 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD58P19256 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.75■□□□□ 0.75
CD58P19256 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD58P19256 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CD58P19256 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.75■□□□□ 0.75
CD58P19256 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD58P19256 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CD58P19256 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.74■□□□□ 0.75
CD58P19256 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.74■□□□□ 0.75
CD58P19256 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.74■□□□□ 0.75
CD58P19256 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CD58P19256 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CD58P19256 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.74■□□□□ 0.75
CD58P19256 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.74■□□□□ 0.75
CD58P19256 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.74■□□□□ 0.75
CD58P19256 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CD58P19256 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CD58P19256 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.74■□□□□ 0.75
CD58P19256 AC073592.3-201ENST00000625118 1834 ntBASIC19.74■□□□□ 0.75
CD58P19256 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
CD58P19256 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CD58P19256 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD58P19256 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 AC090164.3-201ENST00000610780 2143 ntBASIC19.73■□□□□ 0.75
CD58P19256 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.73■□□□□ 0.75
CD58P19256 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.73■□□□□ 0.75
CD58P19256 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CD58P19256 RNF152P1-201ENST00000397754 604 ntBASIC19.73■□□□□ 0.75
CD58P19256 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CD58P19256 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.73■□□□□ 0.75
CD58P19256 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.73■□□□□ 0.75
CD58P19256 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.73■□□□□ 0.75
CD58P19256 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.73■□□□□ 0.75
CD58P19256 AL157888.1-201ENST00000631930 593 ntBASIC19.73■□□□□ 0.75
CD58P19256 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CD58P19256 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CD58P19256 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.73■□□□□ 0.75
CD58P19256 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD58P19256 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.73■□□□□ 0.75
CD58P19256 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.72■□□□□ 0.75
CD58P19256 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.72■□□□□ 0.75
CD58P19256 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.72■□□□□ 0.75
CD58P19256 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CD58P19256 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CD58P19256 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 TSPY5P-201ENST00000426936 936 ntBASIC19.72■□□□□ 0.75
CD58P19256 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CD58P19256 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.72■□□□□ 0.75
CD58P19256 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CD58P19256 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD58P19256 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms