Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSDP07339 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 PCDHA12-202ENST00000613593 2588 ntBASIC15.28■□□□□ 0.04
CTSDP07339 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.28■□□□□ 0.04
CTSDP07339 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CTSDP07339 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 GUSBP6-202ENST00000438529 1198 ntBASIC15.28■□□□□ 0.04
CTSDP07339 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSDP07339 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.28■□□□□ 0.04
CTSDP07339 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CTSDP07339 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSDP07339 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSDP07339 AC006116.8-202ENST00000587620 1550 ntBASIC15.28■□□□□ 0.04
CTSDP07339 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTSDP07339 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CTSDP07339 AC099398.1-201ENST00000567919 2776 ntBASIC15.27■□□□□ 0.04
CTSDP07339 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTSDP07339 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSDP07339 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTSDP07339 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTSDP07339 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTSDP07339 AP000593.1-201ENST00000393668 712 ntBASIC15.27■□□□□ 0.04
CTSDP07339 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSDP07339 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSDP07339 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.27■□□□□ 0.04
CTSDP07339 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSDP07339 AC104771.1-201ENST00000603335 964 ntBASIC15.27■□□□□ 0.04
CTSDP07339 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.27■□□□□ 0.04
CTSDP07339 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CTSDP07339 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.27■□□□□ 0.03
CTSDP07339 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.27■□□□□ 0.03
CTSDP07339 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CTSDP07339 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.27■□□□□ 0.03
CTSDP07339 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CTSDP07339 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.27■□□□□ 0.03
CTSDP07339 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
CTSDP07339 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSDP07339 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSDP07339 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSDP07339 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSDP07339 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 HLA-L-209ENST00000420110 1011 ntBASIC15.26■□□□□ 0.03
CTSDP07339 POM121L13P-201ENST00000422362 380 ntBASIC15.26■□□□□ 0.03
CTSDP07339 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms