Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 AC011767.1-201ENST00000617410 1153 ntBASIC13.37□□□□□ -0.27
TNFRSF6BO95407 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 AC231657.2-201ENST00000624556 255 ntBASIC13.37□□□□□ -0.27
TNFRSF6BO95407 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFRSF6BO95407 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 PP12613-201ENST00000424958 2230 ntBASIC13.36□□□□□ -0.27
TNFRSF6BO95407 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 AC007322.1-201ENST00000426983 750 ntBASIC13.36□□□□□ -0.27
TNFRSF6BO95407 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 AL160286.2-201ENST00000567150 934 ntBASIC13.36□□□□□ -0.27
TNFRSF6BO95407 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFRSF6BO95407 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 AL357033.4-201ENST00000617703 1807 ntBASIC13.35□□□□□ -0.27
TNFRSF6BO95407 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 AC016769.1-201ENST00000409132 1010 ntBASIC13.35□□□□□ -0.27
TNFRSF6BO95407 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 KRT8P32-201ENST00000512863 1461 ntBASIC13.35□□□□□ -0.27
TNFRSF6BO95407 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFRSF6BO95407 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms