Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.29■□□□□ 0.52
TM9SF1O15321 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.29■□□□□ 0.52
TM9SF1O15321 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF1O15321 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF1O15321 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.29■□□□□ 0.52
TM9SF1O15321 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.29■□□□□ 0.52
TM9SF1O15321 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.29■□□□□ 0.52
TM9SF1O15321 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF1O15321 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.29■□□□□ 0.52
TM9SF1O15321 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF1O15321 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TM9SF1O15321 PP12613-201ENST00000424958 2230 ntBASIC18.29■□□□□ 0.52
TM9SF1O15321 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF1O15321 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TM9SF1O15321 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 AC080080.1-201ENST00000625121 2420 ntBASIC18.28■□□□□ 0.52
TM9SF1O15321 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF1O15321 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF1O15321 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF1O15321 AC004980.1-204ENST00000429707 299 ntBASIC18.28■□□□□ 0.52
TM9SF1O15321 KRT16P5-201ENST00000455284 522 ntBASIC18.28■□□□□ 0.52
TM9SF1O15321 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF1O15321 AC098934.4-201ENST00000564127 592 ntBASIC18.28■□□□□ 0.52
TM9SF1O15321 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF1O15321 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.28■□□□□ 0.52
TM9SF1O15321 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF1O15321 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF1O15321 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF1O15321 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 AC141586.5-201ENST00000624546 2050 ntBASIC18.27■□□□□ 0.52
TM9SF1O15321 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TM9SF1O15321 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.27■□□□□ 0.52
TM9SF1O15321 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
TM9SF1O15321 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TM9SF1O15321 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TM9SF1O15321 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF1O15321 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.27■□□□□ 0.52
TM9SF1O15321 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.27■□□□□ 0.52
TM9SF1O15321 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF1O15321 MTDHP1-201ENST00000605323 784 ntBASIC18.27■□□□□ 0.52
TM9SF1O15321 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF1O15321 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF1O15321 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF1O15321 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.27■□□□□ 0.51
TM9SF1O15321 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF1O15321 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF1O15321 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.27■□□□□ 0.51
TM9SF1O15321 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF1O15321 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF1O15321 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF1O15321 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF1O15321 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF1O15321 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF1O15321 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF1O15321 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF1O15321 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF1O15321 AC091390.4-202ENST00000476426 537 ntBASIC18.26■□□□□ 0.51
TM9SF1O15321 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms