Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.65■□□□□ 0.42
CDX4O14627 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 METTL21AP1-201ENST00000438852 635 ntBASIC17.65■□□□□ 0.42
CDX4O14627 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.65■□□□□ 0.42
CDX4O14627 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.65■□□□□ 0.42
CDX4O14627 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 AL596442.2-201ENST00000610240 980 ntBASIC17.65■□□□□ 0.42
CDX4O14627 MTMR9LP-203ENST00000426597 1545 ntBASIC17.65■□□□□ 0.42
CDX4O14627 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDX4O14627 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.65■□□□□ 0.42
CDX4O14627 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.65■□□□□ 0.42
CDX4O14627 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.65■□□□□ 0.42
CDX4O14627 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 AL137060.1-201ENST00000618151 2648 ntBASIC17.65■□□□□ 0.42
CDX4O14627 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDX4O14627 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDX4O14627 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 CYMP-203ENST00000474680 1263 ntBASIC17.64■□□□□ 0.41
CDX4O14627 RFPL4AP1-201ENST00000530883 850 ntBASIC17.64■□□□□ 0.41
CDX4O14627 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.64■□□□□ 0.41
CDX4O14627 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDX4O14627 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.64■□□□□ 0.41
CDX4O14627 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.64■□□□□ 0.41
CDX4O14627 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDX4O14627 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.64■□□□□ 0.41
CDX4O14627 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDX4O14627 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 AC141586.3-201ENST00000562166 1838 ntBASIC17.63■□□□□ 0.41
CDX4O14627 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.63■□□□□ 0.41
CDX4O14627 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.63■□□□□ 0.41
CDX4O14627 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.63■□□□□ 0.41
CDX4O14627 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CDX4O14627 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDX4O14627 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDX4O14627 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms