Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 AD000864.1-201ENST00000624076 2295 ntBASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 FAM207BP-201ENST00000447172 505 ntBASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC008040.2-201ENST00000461049 708 ntBASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC006058.3-201ENST00000606217 1069 ntBASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 CR392000.1-201ENST00000624770 1228 ntBASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-7A0A0A0MS04 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-7A0A0A0MS04 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-7A0A0A0MS04 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms