Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV26-1A0A087WT03 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 AC087499.1-201ENST00000418141 1075 ntBASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 AC092850.2-201ENST00000623821 2697 ntBASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV26-1A0A087WT03 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 FP475955.4-201ENST00000623131 1990 ntBASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 KRT8P9-201ENST00000558927 1449 ntBASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV26-1A0A087WT03 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms