Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 AC098934.4-201ENST00000564127 592 ntBASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 AC083880.1-201ENST00000608266 535 ntBASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 PKD1P5-201ENST00000532415 10291 ntBASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV9-2A0A087WT02 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 KRT17P3-201ENST00000420566 1262 ntBASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV9-2A0A087WT02 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 PNMA6B-201ENST00000538162 1200 ntBASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 AC022211.2-201ENST00000585075 2527 ntBASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 AC068418.2-201ENST00000577309 3703 ntBASIC13.71□□□□□ -0.21
TRAV9-2A0A087WT02 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms