Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 ITM2C-210ENST00000620962 501 ntBASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV30A0A087WSZ9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 MYLKP1-201ENST00000509077 1580 ntBASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 CA15P1-201ENST00000481698 905 ntBASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV30A0A087WSZ9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 AC096733.2-201ENST00000609937 1394 ntBASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 AC008040.2-201ENST00000461049 708 ntBASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 MIR4651-201ENST00000582622 73 ntBASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 CD177P1-201ENST00000606252 935 ntBASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV30A0A087WSZ9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms