Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 AP000550.4-202ENST00000639755 178 ntBASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN16Q9Y5I7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 AC093677.2-201ENST00000600169 1863 ntBASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN16Q9Y5I7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 GMCL1P1-201ENST00000463439 1581 ntBASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 IER3-202ENST00000376377 1350 ntBASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 IGHGP-201ENST00000390555 1178 ntBASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 KRT18P48-201ENST00000434763 852 ntBASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 AL390719.2-201ENST00000606993 987 ntBASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN16Q9Y5I7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 AC113404.2-201ENST00000507884 177 ntBASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 AC005332.3-201ENST00000589904 676 ntBASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 AC011498.5-201ENST00000592027 486 ntBASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 PHGDH-209ENST00000641074 1780 ntBASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms