Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 REXO1L9P-201ENST00000604264 2108 ntBASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 PKD1P1-201ENST00000458669 6805 ntBASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB1Q9Y5G3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 MIPEPP3-201ENST00000412105 444 ntBASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 AC092118.2-201ENST00000613495 667 ntBASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 HLA-B-256ENST00000639848 1089 ntBASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 NKILA-202ENST00000614771 2598 ntBASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 AC112777.1-201ENST00000540175 1423 ntBASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB1Q9Y5G3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 AC092368.3-202ENST00000574180 1591 ntBASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 AC022211.2-201ENST00000585075 2527 ntBASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 AC120498.8-201ENST00000614275 531 ntBASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms