Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 AC116562.2-201ENST00000507042 360 ntBASIC17.26■□□□□ 0.35
IFT52Q9Y366 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 AC096733.2-201ENST00000609937 1394 ntBASIC17.26■□□□□ 0.35
IFT52Q9Y366 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.26■□□□□ 0.35
IFT52Q9Y366 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT52Q9Y366 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 PRORSD1P-201ENST00000295112 541 ntBASIC17.25■□□□□ 0.35
IFT52Q9Y366 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT52Q9Y366 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.25■□□□□ 0.35
IFT52Q9Y366 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 NUDT16P1-203ENST00000513809 620 ntBASIC17.24■□□□□ 0.35
IFT52Q9Y366 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
IFT52Q9Y366 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT52Q9Y366 AL499627.1-201ENST00000569373 2188 ntBASIC17.23■□□□□ 0.35
IFT52Q9Y366 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 AL356309.3-201ENST00000624132 1934 ntBASIC17.23■□□□□ 0.35
IFT52Q9Y366 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 RPS2P55-201ENST00000397318 883 ntBASIC17.23■□□□□ 0.35
IFT52Q9Y366 AC012618.2-201ENST00000428058 849 ntBASIC17.23■□□□□ 0.35
IFT52Q9Y366 AC107956.1-201ENST00000494359 873 ntBASIC17.23■□□□□ 0.35
IFT52Q9Y366 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 KRT18P41-201ENST00000518924 1277 ntBASIC17.23■□□□□ 0.35
IFT52Q9Y366 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms