Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 AK4P3-201ENST00000418260 669 ntBASIC17.23■□□□□ 0.35
CNIH4Q9P003 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 LINC01238-205ENST00000567549 1107 ntBASIC17.23■□□□□ 0.35
CNIH4Q9P003 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 AC140113.3-201ENST00000605663 199 ntBASIC17.23■□□□□ 0.35
CNIH4Q9P003 AC090340.1-201ENST00000620778 4980 ntBASIC17.23■□□□□ 0.35
CNIH4Q9P003 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.23■□□□□ 0.35
CNIH4Q9P003 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH4Q9P003 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 RNF152P1-201ENST00000397754 604 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 DUX4L26-201ENST00000489078 1255 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 MIR3180-5-201ENST00000583743 153 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 AC006011.2-201ENST00000621313 1158 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 CR769767.2-201ENST00000622735 460 ntBASIC17.22■□□□□ 0.35
CNIH4Q9P003 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CNIH4Q9P003 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH4Q9P003 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 LETM1P2-201ENST00000597330 2178 ntBASIC17.21■□□□□ 0.35
CNIH4Q9P003 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 AL109659.2-201ENST00000606809 1674 ntBASIC17.21■□□□□ 0.35
CNIH4Q9P003 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 AC117947.1-201ENST00000427448 529 ntBASIC17.21■□□□□ 0.35
CNIH4Q9P003 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.21■□□□□ 0.35
CNIH4Q9P003 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH4Q9P003 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms