Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 AL355355.2-201ENST00000442321 338 ntBASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LIN7CQ9NUP9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 SNORA78-201ENST00000459373 127 ntBASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 NUDT16P1-203ENST00000513809 620 ntBASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 PRSS44-201ENST00000515154 1146 ntBASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 AC026471.5-201ENST00000615068 467 ntBASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 FSCN1P1-201ENST00000568912 1481 ntBASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIN7CQ9NUP9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 KRT8P32-201ENST00000512863 1461 ntBASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN7CQ9NUP9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 AL499627.1-201ENST00000569373 2188 ntBASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 TSPY7P-201ENST00000431358 1114 ntBASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms