Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 KRT16P1-201ENST00000399124 1418 ntBASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CDC42SE2Q9NRR3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 PKD1P1-201ENST00000458669 6805 ntBASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 GMCL1P1-201ENST00000463439 1581 ntBASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 FAM207BP-201ENST00000447172 505 ntBASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 RN7SL471P-201ENST00000580476 299 ntBASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 AC130371.2-201ENST00000619443 611 ntBASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC42SE2Q9NRR3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 MIR564-202ENST00000385049 94 ntBASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC42SE2Q9NRR3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CDC42SE2Q9NRR3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms