Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 NME2P1-201ENST00000426182 414 ntBASIC17.03■□□□□ 0.32
CHD8Q9HCK8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 FAM207CP-201ENST00000443486 507 ntBASIC17.03■□□□□ 0.32
CHD8Q9HCK8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 RCC2P3-201ENST00000418112 1537 ntBASIC17.03■□□□□ 0.32
CHD8Q9HCK8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 AC010336.2-201ENST00000564226 506 ntBASIC17.03■□□□□ 0.32
CHD8Q9HCK8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 AC004835.2-201ENST00000603762 682 ntBASIC17.03■□□□□ 0.32
CHD8Q9HCK8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.03■□□□□ 0.32
CHD8Q9HCK8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD8Q9HCK8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 ATP5G2P4-201ENST00000442175 420 ntBASIC17.02■□□□□ 0.32
CHD8Q9HCK8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CHD8Q9HCK8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 AC004461.1-201ENST00000412461 403 ntBASIC17.02■□□□□ 0.31
CHD8Q9HCK8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.02■□□□□ 0.31
CHD8Q9HCK8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 FAM86GP-201ENST00000448322 971 ntBASIC17.01■□□□□ 0.31
CHD8Q9HCK8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 AL132655.2-201ENST00000596276 594 ntBASIC17.01■□□□□ 0.31
CHD8Q9HCK8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms