Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC68Q9H2F9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 SLC25A1P2-201ENST00000430693 912 ntBASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 CCR12P-201ENST00000446203 998 ntBASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 AP000525.1-201ENST00000608286 694 ntBASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC68Q9H2F9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 MIR564-202ENST00000385049 94 ntBASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 TSPY17P-201ENST00000450329 467 ntBASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 C2orf69P3-201ENST00000565542 1120 ntBASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC68Q9H2F9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC68Q9H2F9 AC079598.2-202ENST00000546624 1451 ntBASIC18.46■□□□□ 0.54
CCDC68Q9H2F9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 AC034236.2-201ENST00000606662 1610 ntBASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 MIR1238-201ENST00000408483 83 ntBASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 MIR3180-5-201ENST00000583743 153 ntBASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms