Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 ID1-201ENST00000376105 1233 ntBASIC18.55■□□□□ 0.56
VPS11Q9H270 AC004951.3-201ENST00000418645 1148 ntBASIC18.55■□□□□ 0.56
VPS11Q9H270 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.55■□□□□ 0.56
VPS11Q9H270 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 RN7SL471P-201ENST00000580476 299 ntBASIC18.55■□□□□ 0.56
VPS11Q9H270 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS11Q9H270 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS11Q9H270 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS11Q9H270 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VPS11Q9H270 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS11Q9H270 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS11Q9H270 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS11Q9H270 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS11Q9H270 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS11Q9H270 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 RCC2P3-201ENST00000418112 1537 ntBASIC18.54■□□□□ 0.56
VPS11Q9H270 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VPS11Q9H270 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 KRT18P6-201ENST00000555540 1265 ntBASIC18.54■□□□□ 0.56
VPS11Q9H270 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
VPS11Q9H270 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS11Q9H270 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS11Q9H270 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS11Q9H270 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS11Q9H270 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS11Q9H270 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS11Q9H270 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
VPS11Q9H270 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
VPS11Q9H270 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS11Q9H270 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VPS11Q9H270 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 KRT8P45-201ENST00000414328 1447 ntBASIC18.53■□□□□ 0.56
VPS11Q9H270 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.53■□□□□ 0.56
VPS11Q9H270 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS11Q9H270 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS11Q9H270 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS11Q9H270 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.53■□□□□ 0.56
VPS11Q9H270 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
VPS11Q9H270 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.53■□□□□ 0.56
VPS11Q9H270 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
VPS11Q9H270 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS11Q9H270 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS11Q9H270 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS11Q9H270 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
VPS11Q9H270 KSR1P1-201ENST00000446298 240 ntBASIC18.52■□□□□ 0.56
VPS11Q9H270 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS11Q9H270 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.52■□□□□ 0.56
VPS11Q9H270 AC011298.2-201ENST00000617989 482 ntBASIC18.52■□□□□ 0.56
VPS11Q9H270 AC073648.6-201ENST00000641589 218 ntBASIC18.52■□□□□ 0.56
VPS11Q9H270 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.52■□□□□ 0.56
VPS11Q9H270 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS11Q9H270 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.52■□□□□ 0.56
VPS11Q9H270 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
VPS11Q9H270 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms