Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNX27Q96L92 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX27Q96L92 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SNX27Q96L92 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX27Q96L92 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX27Q96L92 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SNX27Q96L92 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.83■□□□□ 0.76
SNX27Q96L92 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX27Q96L92 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SNX27Q96L92 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX27Q96L92 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 AL024508.2-201ENST00000607749 1894 ntBASIC19.82■□□□□ 0.76
SNX27Q96L92 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.82■□□□□ 0.76
SNX27Q96L92 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX27Q96L92 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX27Q96L92 MIR3180-1-201ENST00000580374 94 ntBASIC19.82■□□□□ 0.76
SNX27Q96L92 MIR3180-3-201ENST00000584616 94 ntBASIC19.82■□□□□ 0.76
SNX27Q96L92 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.82■□□□□ 0.76
SNX27Q96L92 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX27Q96L92 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
SNX27Q96L92 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX27Q96L92 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX27Q96L92 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 AC005082.1-201ENST00000413042 2259 ntBASIC19.81■□□□□ 0.76
SNX27Q96L92 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX27Q96L92 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX27Q96L92 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX27Q96L92 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX27Q96L92 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX27Q96L92 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX27Q96L92 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX27Q96L92 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX27Q96L92 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SNX27Q96L92 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX27Q96L92 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SNX27Q96L92 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 AC004870.1-201ENST00000315132 882 ntBASIC19.8■□□□□ 0.76
SNX27Q96L92 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX27Q96L92 AP002414.4-201ENST00000589764 1148 ntBASIC19.8■□□□□ 0.76
SNX27Q96L92 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX27Q96L92 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX27Q96L92 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX27Q96L92 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX27Q96L92 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
SNX27Q96L92 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX27Q96L92 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 AC018445.3-201ENST00000624177 1945 ntBASIC19.79■□□□□ 0.76
SNX27Q96L92 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX27Q96L92 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX27Q96L92 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms