Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 KRT18P38-201ENST00000449496 1282 ntBASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 AL353719.1-201ENST00000566847 864 ntBASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPGRIP1Q96KN7 AC090340.1-201ENST00000620778 4980 ntBASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.28■□□□□ 0.84
RPGRIP1Q96KN7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms