Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 AL096828.2-201ENST00000567259 1965 ntBASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM5Q96HC4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 ECEL1P3-201ENST00000427961 737 ntBASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 AC145285.6-201ENST00000604632 637 ntBASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 AC008764.6-201ENST00000595909 2069 ntBASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM5Q96HC4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 AP000523.1-201ENST00000398242 1049 ntBASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 LINC01126-201ENST00000623515 1646 ntBASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms